BBSRC spring conference 2024
Welcome to the landing page for people who found my poster at the Nottingham spring conference. This website is still under actiuve development. However, I wanted to get a protype up and running for this conference.
Poster
Author contact details
Sam Windle.
School of veterinary Medicine and science, University of Nottingham, Sutton Bonnington Campus.
Poster abstact
Poster references
[1] Wee BA, Muloi DM, van Bunnik BAD. Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics. Clin Microbiol Infect. 2020 Dec;26(12):1612-1616. doi: 10.1016/j.cmi.2020.09.019. Epub 2020 Oct 1. PMID: 32979568; PMCID: PMC7721588.
[2]Kappes A, Tozooneyi T, Shakil G, Railey AF, McIntyre KM, Mayberry DE, Rushton J, Pendell DL, Marsh TL. Livestock health and disease economics: a scoping review of selected literature. Front Vet Sci. 2023 Sep 19;10:1168649. doi: 10.3389/fvets.2023.1168649. PMID: 37795016; PMCID: PMC10546065.
[3] mOTU: Ruscheweyh, HJ., Milanese, A., Paoli, L. et al. Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments. Microbiome 10, 212 (2022). https://doi.org/10.1186/s40168-022-01410-z
[4] The Sequencer: http://sequencer.org/documentation
Poster download
You liked it so much you wanted your own copy? For now you can download it here. This link may go away once I have solved other hosting issues.
Code
Want to run it yourself? I’m still actively developing the code, and it’s note ready for prime time yet, but when it is, it will be available here:
https://github.com/Swindle98/Bovine_Long_ML
Eventually I envisage this beng a well documented suite of tools that other atttempting longitudinal studies can use to speed up their research.